Results

Supercharging SIP in the Fungal Hyphosphere
… successfully automated aspects of a commonly-used process for studying microbial communities, with results published in … labor and improve results. Applying this method to the study of a particular fungi, researchers identified novel …
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Cataloging the Microbes that Manage the Health of River Systems
States. They also provided multiple access points to the information. The team harnessed a community-science program to … Colorado State University researchers led a consortium to study river microbiomes. To understand the microbiology of … were also funded under the RC-SFA at PNNL by DOE BER ESS. Metagenomic and metatranscriptomic sequencing was performed …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all … retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant for …
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Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes
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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … from Ed Hall, an ecologist at Colorado State University in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial communities. …
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Marine Microbe Contains Multitudes
SAR324 exist in so many varied environments? Now, a recent study published in Microbiome has uncovered that SAR324 … help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … SAR324 is able to influence this carbon pool. Summary To study the lifestyles of SAR324, lead author Dominique Boeuf …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications … (Berkeley Lab), to fill in these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the … the JGI has pioneered, including single-cell genomics and metagenomics. The GEBA initiative has also utilized a very …
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