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Natural soil microbes alter flowering phenology and the intensity of selection on flowering time in a wild Arabidopsis relative
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … microbes and viruses. Prior to joining the JGI, she was a Bioinformatics Program Fellow at the Gordon and Betty …
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Learning to Look
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are stealth agents … through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 inovirus-like …
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Marine Microbe Contains Multitudes
… bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … designed for analysis of DNA and RNA sequence data.  … Datasets … BBTools …
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A Plant Root Atlas for Tracking Developmental Trajectories
… and combining the information with previously published datasets. The work was  recently published in the journal  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism
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Restoring wetlands on intensive agricultural lands modifies nitrogen cycling microbial communities and reduces N2O production potential
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community … Tips: Contact us with your questions (jgi-jira+pmosup[email protected]) Carefully read our proposal call description … this type of data set. Having a co-PI with complementary skills can show reviewers the team is really able to take …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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Finding the Fermenters
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Research (BER) program to enable scientific discovery in support of the DOE mission. Fermentative metabolism occurs in … Fermentation Explorer ( GitHub ) with a series of large datasets. One test was to predict traits of more than 400 …
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Disclaimer
… monitoring of this use by system or security personnel. … With respect to documents available from this server, … by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of … any statement of authorship are reproduced on all copies. JGI is not responsible for the contents of any off-site …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have … microbial DNA is manually separated into a few different groups based on its density — DNA containing isotopes is … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National …
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