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The Expanding Universe of Methane Metabolisms in Archaea
… of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) … in April, which immediately precedes the JGI’s 14th Annual Genomics of Energy & Environment Meeting. Registration for …
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An Automated Tool for Assessing Virus Data Quality
… virus sequences vary widely. In a previous effort, an international consortium recommended specific … limits the ability of researchers to accurately perform functional assessment, host prediction, and phylogenetic … (from environmental metagenome samples) from IMG/VR , a database that is part of the Integrated Microbial Genomes & …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … of SIP experiments have generated plenty of insights, many studies don’t report the information needed to reuse and … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like these …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated … the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …
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A Genomic Perspective Across Earth’s Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy
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A One-Stop Shop for Analyzing Algal Genomes
… Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … — so researchers can easily explore the evolutionary and functional relationships among the different algae. …
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed … research results in genomics, metagenomics and the human microbiome. The workshop will train participants in … and seminars as well as practical hands-on sessions in bioinformatics and biostatistics. …
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MicrobesOnline: an integrated portal for comparative and functional genomics
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A segmental genomic duplication generates a functional intron
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Complete Genome Sequence of the Metabolically Versatile Plant Growth-Promoting Endophyte Variovorax paradoxus S110
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Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont
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Extreme overall mushroom genome expansion in Mycena s.s. irrespective of plant hosts or substrate specializations.
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