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Busting the Unbreakable Lignin
… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … (MAO), US Army Research Office contract W911NF-19-1-0010 (MAO), National Science Foundation grant MCB-1553721 …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes … a team led by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … R.C. was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … feedstocks of interest to the U.S. Department of Energy (DOE). (Poplar is a Flagship Plant.) To engineer them, … Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research and Development Program of …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The … establishment and maintenance is supported by the US DOE, Office of Science, Office of Biological and … Grant No 660280), and the VILLUM FONDEN (research grant 15510). … Sphagnum fallax on Phytozome … Datasets …
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Making a Lichen Together
The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … Fungal & Algal Program lead at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … by the National Science Foundation under Grant No. 1011101 to E.S. and J.M.L. … Fungus Genome on MycoCosm data …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … Biotechnology , a team from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The … working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … of satisfaction. … This work was supported by NSF DEB-1541005 and start-up funds from UF to S.F.M.; microMORPH …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The … genes were synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community …
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Accelerating Metagenomics Discoveries with Deep Learning
Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating … is part of the JGI Genome R&D Group and is one of more than 100 scientists and systems engineers involved in …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley … Research, Early Career Research Program awarded under UC-DOE Prime Contract DE-AC02-05CH11231. The work conducted by …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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