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Calculating the Costs of Multiple Switchgrass Gene Copies
… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … a specific environment — whether that be soil, animal hosts, marine ecosystems, etc.  “So, they must be doing … majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences evaded …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … Metagenome Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data … and characterize viral diversity, understand the role of viruses in natural ecosystems, and functionally explore …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth … Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio   ALISON:  …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents … and expertise of multiple DOE National User Facilities in one research proposal.  Successful applications will …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … DJ, Iwai M, Louie KB, Mueller M, et al. Regulation of Oxygenic Photosynthesis during Trophic Transitions in the …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 Ernest Orlando Lawrence Award , … the roles of microbial communities in carbon cycling, in interactions with plants, and as drivers of methane …
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … and bioproducts, Biogeochemistry, and Inter-organismal interactions. Algal research features prominently among the … reaction networks, and also assessing the role of viruses in the soil microbiome. Another accepted proposal in …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … plants to convert carbon dioxide and water into sugars and oxygen. Both sugarcane and corn share this photosynthetic …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling … engineering pathways to function in heterologous hosts, by combining combinatorial synthesis, high-throughput …
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