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… Populus across genotypes and environments. 2024 Nature Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  …

… and analyze the single nuclei and spatial transcriptomics data this work leverages.   These experiments focused on two … hair. At such resolution, this spatial transcriptomics data captured molecular information from both plant cells … in addition to associated plant genes.  All together, these data offer a granular view of both plant and fungal activity …

… Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific enough for … from their soil samples. This gene expression dataset was particularly important for characterizing fungal …

… results this year by assembling a collection of large datasets that will enable scientists to explore and collect data in new ways,” she said. “We’re excited to be able to … for the first time these large environmental  microbial data sets for JGI users, which include projects looking at …

… write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri …

… metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State …

… a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research …

… Lab (short talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, Convention Center Rm … “EMSL’s 1000 Soils Project: core collection strategy and data types available” December 17  6:40am Convention Center … Weisenhorn, KBase at Argonne (lightning talk): “Applying Data Standards and Reproducible Workflows To Advance Earth …

… Communications , two research teams joined forces and data sets to describe bacterial genomes for related … Carnevali and Schulz sharing co-first authorship. Their data suggests that the shared common ancestor of all five …

… infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the …

… of a virus relative to its host (inferred through sequence data) can suggest different predatory behaviors. A high … Winner” — “Piggyback the Winner.” In the microbial mat, the data suggest viruses are indeed piggybacking their hosts. … terrestrial environment with low mobility. The metagenomic data suggests that viruses don’t diffuse well through the …

… quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In … include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the launching of a …