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The Power of One, Amplified
… For example, they showed that the composition of the community was similar across sequencing approaches, that … cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… what makes polar photosynthesizers tick. He’s working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this …
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Biogeochemical Cycling by a Low-Diversity Microbial Community in Deep Groundwater
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Genome-reconstruction for eukaryotes from complex natural microbial communities
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Plant–microbiome interactions: from community assembly to plant health
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Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes
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Busting the Unbreakable Lignin
… fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … anaerobic fungi could be used to effectively modify lignin without oxygen and make use of it, it would change the … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … (Berkeley Lab) describes it, JGI researchers have also collaborated to advance computing infrastructure and … such tools has been a collaborative effort. For example, with support from the  Exascale Computing Project , the JGI …
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Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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Tracking the Origins of Methane-Producing Microbes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … most of them archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… terpene synthase gene family across eucalypt lineages. The Science From the distinct smell of eucalyptus to the flavor … Corymbia are more abundant in the drier parts of Australia with lower quality soils and even in the desert areas with … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to …
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Plant Microbial Interactions Group
… of their bacterial host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled experimental and … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: … (Tokyo University) Dongfong Wang (Spelman University, VFP Program) Emerald Nash (UC Merced Intern) Tyrome Sweet (UC …
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