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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director … Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the faculty of University of … National Cotton Council 2009 Friday Evening Lecturer, Marine Biological Laboratory 2000 John Simon Guggenheim …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … lineages in the NCLDV group infect mainly protists and algae, and some of them have genomes in the megabase range. … to viral lineages, and predominantly in samples from marine (55%) and freshwater (40%) environments. As a result, …
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, … pointing device to zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI …
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Effects of Polar Light Cycle on Microbial Food Web
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Ace Lake is covered in thick ice, with a combination of marine and freshwater below. This stratified mixture holds … Preliminary observations regarding the contributions of algae and viruses to the ecosystem were noted, but require …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… version of a specific chemical, where ordinary Carbon-12 atoms are swapped for the heavier, non-radioactive isotope Carbon-13, researchers can then safely follow the path of that … proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), … program does for UC Merced students. He described it as “life changing” for the interns and loved the opportunities …
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Streamlining Regulon Identification in Bacteria
… in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … efficacy of RIViT-seq, researchers recently characterized 12 sigma factors and were able to identify the associated … 18, with the number of factor-gene pairs almost doubling to 399. Two of the 11 sigma factors addressed in the study were …
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Marianne Buscaglia
… who uses metagenomics to study giant viruses in cold marine environments and is interested in analyzing genes …
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Diverse events have transferred genes for edible seaweed digestion from marine to human gut bacteria
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Viruses infecting a warm water picoeukaryote shed light on spatial co-occurrence dynamics of marine viruses and their hosts
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Comparative proteomic profiles of the marine cyanobacterium Trichodesmium erythraeum IMS101 under different nitrogen regimes
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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