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A Collaboration to Improve Plant Genome Annotations Across Species
… which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … learn more about the project, HudsonAlpha’s Research Communication Manager Sarah Sharman recently interviewed study … (JGI)*, a national user facility located at Lawrence Berkeley National Laboratory, and add additional gene …
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JGI on the 2020 Highly Cited Researchers List
… fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by … appeared in  Studies in Mycology and in  Nature Communications , respectively. Dan Rokhsar and  Jeremy Schmutz were … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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A Community Resource for Secondary Metabolite Researchers
… user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most … research community. With more than 13 million BGCs in the catalog at the time of publication, it is the largest … (JGI), a DOE Office of Science User Facility located at Berkeley Laboratory, built off past experience in developing …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, Biotechnology, University of Tokyo … Otani H, Mouncey NJ. RIViT-seq enables systematic identification of regulons of transcriptional machineries. Nat …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a … and resources focused on three human chromosomes: Lawrence Berkeley National Laboratory researchers were studying … the human genome. They wanted to learn about the genes implicated in the development of breast and prostate cancer, and …
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A Plantiful Future: Xiaohan Yang
… using gene editing technology to conscientiously mix traits of different plant species will help us get there. …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon …
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Marianne Buscaglia
… in analyzing genes that can impact the metabolism of their hosts. …
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … (Pactolus). … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in Bioengineering, Arizona State … in situ kinetic histochemistry. Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer … & Albert Wu Project: “ Pangenome de Bruijn Graph Simplification ” Peter Nguyen : “Being an JGI intern has been an … the forefront.” Mentors: Rex Malmstrom, Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded …
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JGI announces 2024 New Investigator portfolio
… is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel … under our Community Science Program . Below find a list of researchers whose proposals were accepted for 2024. Harnessing the JGI’s  resources, these researchers …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 2
… and isotopes to track how viruses influence the flow of carbon in permafrost.  …
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