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SPRUCE-ing Up Science
… in his backyard. Originally from northern California and one of the first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, … up question and answer session. “A great presentation not only helps students effectively communicate their …
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Honey Bee Gut Microbiota Divvy Up Dinner
… when it comes to metabolizing complex polysaccharides. Honey bees are invaluable pollinators — cupids of the plant … to an extent.  Gilliamella  primarily degrades pectin. But not all strains of  Gilliamella  are capable of pectin … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … can be used to create compounds more efficiently than one strain could on its own.  In work published in  … the CRAGE technology. Instead of only accommodating one DNA insertion, the new system, CRAGE-Duet, can …
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Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium
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Better Crops With a Pointillist Approach to Plant Genomics
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Gone with a trace: cataloguing the disappearing gut microbes
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Busting the Unbreakable Lignin
… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … (The JGI also conducted RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear …
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JGI Accepts 17 Proposals for Community Science Program
… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … a previous international collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing … are led by researchers, including Nelson and Roth, who have not been a principal investigator on a previously approved …
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DAP-seq Drives Robust Mapping of Gene Regulation
… to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … Berkeley National Laboratory. “These proteins’ binding preferences are very, very stable over long evolutionary … adaptation. “You learn a lot more than you would from each one individually,” Baumgart added. “By combining these data, …
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The Chlamydomonas genome project: a decade on
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Genomics of the origin and evolution of Citrus
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Genome sequence of the palaeopolyploid soybean
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