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… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of …

My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable …

The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane …

Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar …

In 2024, the DOE Joint Genome Institute and Alabama A&M … an internship program to bring students to the JGI for research training experience. Enabled by the DOE … Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the …

… and occasionally remembering to document his code. At JGI, he develops tools for viral discovery and analysis, …

… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, … superphylum of extremophilic archaea first outlined by JGI scientists and their collaborators in 2013. While most …

Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …

New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to …

… snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and …

… in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 gave interns the opportunity to be fully immersed in …

Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots …