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… switchgrass ( Panicum virgatum ), which has established 10 experimental gardens located in eight states spread … from half of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and in the laboratory. “We are fortunate because the progenitor species of  Brachypodium hybridum are … with a maternal  B. distachyon parent (D plastotype) some 1.4 million years ago (Mya), while the S plastotype was a …

…   To understand virus-host dynamics, computation helps fill in what cultivation … these different routes. To train the model, the team used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, …

… to gain and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined … popularizer and communicator (and at one time, the spouse of Lynn Margulis). The information was then used to …

… the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of … of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that unlike most flowering …

Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among … Nikos Kyrpides Dan Rokhsar Simon Roux Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of … (Watch SCGSR fellows Nick Reichart and Ian Rambo talk about their experiences at the JGI.) Igor Grigoriev hosted …

… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … a colored-in page of that book. Published online September 28, 2022, in Cell , a team led by researchers at Tel Aviv … study. Members of the Tel Aviv and NCBI teams, who were already working on mining prokaryotic viruses together, …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Science Program (CSP) .  Through this collaboration, in 2017, they published the first genome sequence of a …

Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a … Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in … analysis of two extremophilic algae reveals iron economy management. PNAS  120(30):e2305495120. Pasquini M, Grosjean …

… highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name … from around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 … atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the JGI DNA Synthesis Science Program, which started in 2012, and what they’ve discovered through their …

… (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene Expression Center, … For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … the crop and its microbiome. For three consecutive years (2016-2018), researchers conducted large-scale experiments in …