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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … DOE works with the National Nuclear Security Administration to maintain the U.S. nuclear weapons stockpile and was … al. The DNA sequence and biology of human chromosome 19 . Nature. 428, 529–535 (2004). doi:10.1038/nature02399 …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… best in certain regions. Most plant species have adapted to their local environments; for example, crop and … and other applications, and breeders aren’t interested in waiting decades to develop new crops. One example is an … of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the University of …
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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these … possibilities, and maximizes returns from the demanding nature of SIP experiments.  Especially as machine learning …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… link in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In … that the flagellum was retained in some terrestrial fungal lineages for an extended period of time, which would be …
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Dynamic cyanobacterial response to hydration and dehydration in a desert biological soil crust
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to … trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium. Genetics, 223 (2), … of Brachypodium hybridum and its diploid progenitors. Nature Communications 11 (1), 1-16 …
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JGI@25: The Little Alga That Could
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … a single-celled alga with a unique place in evolutionary history. Retaining ancestral features of both plant and animal … as a Harvard postdoc. While she had intended to work on cyanobacteria, fate stepped in when a fire at the lab …
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Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome
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Game On: High School Students Drive Everglades Metagenomics Study
Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to help train the next generation of scientists. She shares … In the summer of 2018, Jonathan Benskin was preparing to teach a second year A-Level Advanced International …
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JGI@25: Solving the Mystery of the Missing Oil
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … nearly five million barrels of light crude oil spilling into the Gulf of Mexico, researchers at Lawrence Berkeley … To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based array …
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