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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley National Laboratory … fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified across …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy Institute (JBEI). Questions …
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An Earth Month Look at Sustainability Efforts at the JGI
… program manager for  Sustainable Berkeley Lab (SBL). By 2030, Berkeley Lab  aims to cut its greenhouse gas emissions … tackle a challenge at a much different scale — moving a 3-foot long, spiny cactus into its new home at the lab, …
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Learning to Look
… these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of … By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the 56,868 microbial genomes and 2,249 … better at seeing them, which means we can now study their biology much more meaningfully,” Roux noted of the result. …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… algae in the ocean. “Although single-celled, photosynthetic organisms can form massive blooms in the ocean … and that’s hugely important – serving as half of the photosynthetic activity on Earth,” Weizmann explained.   These … McClintock brought this background, which focuses on cell biology and how the structure and function of chromosomes …
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JGI@25: From Life at the Extremes to Editing Genomes
… nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright AV … Two-Protein-type V-C CRISPR System. Mol Cell. 2019 Feb 21;73(4):727-737.e3. doi: 10.1016/j.molcel.2018.12.015. …
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Emiley Eloe-Fadrosh
… and Betty Moore Foundation as part of the Marine Microbiology Initiative. She conducted her postdoctoral training … BS, Biochemistry and Cell Biology, University of California, San Diego ( magna cum laude ) PhD, Marine Biology, Scripps Institution of Oceanography …
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JGI@25: Studying Sorghum’s Survival Skills
… sugars and oxygen. Both sugarcane and corn share this photosynthetic pathway. However, neither crop shares sorghum’s … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for … BGC Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Simon Roux
… B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data … France Ph.D. in Bioinformatics, Ecology and Evolutionary Biology, Université Blaise Pascal, France … metagenome-derived viruses of archaea and bacteria. PLoS Biology 21, e3002083 Roux et al., 2021. Ecology and …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… these sex chromosomes and their role in sphagnum’s survival opens up a new avenue to explore for protecting these … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US Department of Energy (DOE) …
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John Vogel
… BS in Plant Science, Cornell University, NY; PhD in Biology, University of Illinois at Chicago, IL Postdoctoral … Carnegie Institution for Science, Department of Plant Biology … Scarlett, et. al. 2023 Multiple origins, one evolutionary trajectory: gradual … lineages of allotetraploid Brachypodium. Genetics, 223 (2), art. no. iyac146 DOI: 10.1093/genetics/iyac146 …
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