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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back at the JGI’s … out to the future of the institution. Their talks shed light on how the JGI was established, all that it has …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus … genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and Antarctica. A  new … away in wood, converting it into their own carbon-rich structures, as well as atmospheric carbon dioxide.  Summary …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental … Automated Laboratories: Integrating Experimentation with Data.” The event will take place at the Seattle …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… s ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have … other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The Impact … had not been known to produce flagella — propeller-like structures that enable organisms to swim around. However, …
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have … and archaea, actively engaging with the fungi — highlighting the hyphosphere as an even more complex and dynamic …
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Nikos Kyrpides
… at the University of Illinois at Urbana-Champaign and at Argonne National Laboratory. Dr. Kyrpides’ research focus on … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters … Human Intestinal Tract ( MetaHIT ); Community Cyber-infrastructure for Advanced Marine Microbial Ecology Research and …
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What Happens To a Rainforest When You Dial Up Drought?
Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, …
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