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Ecological and genomic responses of soil microbiomes to high-severity wildfire: linking community assembly to functional potential
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Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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Busting the Unbreakable Lignin
… components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: … the plant, like the brick-and-mortar of a building or the human skeleton. It’s more complex, and poisons enzymes and … Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes …
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A Plant Root Atlas for Tracking Developmental Trajectories
… and combining the information with previously published datasets. The work was  recently published in the journal  … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). “This represents the largest … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and … switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the …
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A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines … and applying laboratory ecosystems to help transition microbiome science from largely observational to … precise manipulation and reproducible experimentation of microbiome dynamics. Together, we will explore cutting-edge …
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Strain Engineering
The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous expression and …
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Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina
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Diversity and heritability of the maize rhizosphere microbiome under field conditions
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