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Silver age of GOLD introduces new features
… making curated microbiome metadata that follows community standards freely available, and enabling large-scale … sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … Filling in the Plant Tree of Life … Plant Datasets …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … whole set of bioassays here at JGI. We don’t have the infrastructure. It’s too many resources for us. So we need good … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his … to learn more about our seven science program — their areas of focus, major initiatives and more.  …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to … where we can keep improving it, but this rapid shift in population and the environmental implications of it. I mean, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Frigoriflavimonas asaccharolytica gen. nov., sp. nov., a novel psychrophilic esterase and protease producing bacterium isolated from Antarctica
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly … ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … CRAGE to rapidly label  E. coli  in order to monitor population dynamics in co-culture. These experiments aim to …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions … planet’s resources are being stretched by a growing human population and increasing demand for agricultural products.  …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next … Gilliamella,  which mostly resides in the bee’s ileum, a structure analogous to the human small intestine; and  …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the … has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … project. These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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Taking Stock of the Known and Unknown Microbial Space
… microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. …
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