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Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’

Biotech Partners Summer Intern Co-Authors NAR Paper

… Kaushal Sharma, one of five Antioch High School rising juniors who participated in … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates … as reviewing close to 3,800 metagenomes to verify geographic locations and assign latitude and longitude values. …

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Natural Prodcast Episode 21: Elizabeth Parkinson

… DAN: All right. Welcome back to Natural Prodcast. I did it. … not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … (or Betsy) Parkinson from Purdue University. She’s in the Department of Chemistry and the Department of Medicinal …

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Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations

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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies

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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure

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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.

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Chromosome-scale Genome Assembly of the Most Abundant Ectomycorrhizal Fungus Cenococcum Geophilum Reveals Massive TE Expansion and RIP Defense Mechanism

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Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities