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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the … where he leads three groups focused on HTP DNA design and assembly, strain engineering and bioinformatic tool … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and … Glycine max on Phytozome … Plant Datasets …
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … Waldo will have all of these features. As described July 22, 2019, in  Nature Microbiology , a team led by scientists …
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Taking Stock of the Known and Unknown Microbial Space
… microbial diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE Office of Science …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … the vulnerabilities of monocultures and the benefits of nitrogen-fixing nodules in legumes, which can reduce …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … AB in Physics, Princeton University, NJ MS in Theoretical …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their … postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont … to learn more about the program's areas of focus, major initiatives and more.  …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. …
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