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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky … project, “ Advanced analytics for uncovering virus dynamics and functional potential ," is among the five …
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JGI User Executive Committee Expands
Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the … change biodiversity, and how these changes affect the dynamics and functioning of ecosystems. She leads a recently …
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Graduate Students Get Thesis Research Opportunity at the JGI
Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … of Natural Sciences. “I’m deeply concerned about climate change and this is a remarkable opportunity to launch a pilot … the poorly-understood viral pressures on carbon cycling dynamics at the terrestrial-marine interface, which at a …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … understanding the global carbon cycle and greenhouse gas dynamics, and the engineering of new, optimized …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental and energy challenges. … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Daniel Udwary
… for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of … (1996) … List available on Google Scholar … Education … Publications …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, … technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … of Cell Identity as an R package … Education … Selected Publications … Software …
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … metagenome binning software … Education … Selected Publications … Software …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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