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Novel assembly strategy cracks open the mysteries of walnut genome evolution
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Culexarchaeia, a novel archaeal class of anaerobic generalists inhabiting geothermal environments
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research … the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user … outstanding collaborative opportunity with JGI’s experts in computational biology and microbial ecology will allow me to …
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A Variable Polyglutamine Repeat Affects Subcellular Localization and Regulatory Activity of a Populus ANGUSTIFOLIA Protein
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The F-box protein gene exo-1 is a target for reverse engineering enzyme hypersecretion in filamentous fungi
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VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families
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Development of genetic tools for heterologous protein expression in a pentose‐utilizing environmental isolate of Pseudomonas putida
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Uncovering Sequence and Structural Characteristics of Fungal Expansin‐Related Proteins With Potential to Drive Substrate Targeting
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … Moving toward 10,000 fungal genomes and beyond will yield novel enzymes and metabolites, enable prediction of fungal …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for … economic value as both biofuel feedstock and their role in carbon sequestration. Poplar trees grow quickly in a variety … microbial communities. This revealed key metabolic pathways and metabolites associated with the tree’s stress …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC … an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases … development. Summary With the aim of producing at least one reference genome for every family of fungi, the 1000 …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … as a baseline, we can allow a user to collect all of the ‘protein FASTA files’ more easily.” He also elaborated on the … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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