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Phylogenetic and metagenomic analysis of Verrucomicrobia in former  agricultural grassland soil
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DNA Sequence Analysis of an Inversion Hot Spot in Lobeliaceae Plastomes
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A standardized quantitative analysis strategy for stable isotope probing metagenomics
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A metagenome-level analysis of a microbial community fermenting ultra-filtered milk permeate
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AlloSHP: deconvoluting single homeologous polymorphism for phylogenetic analysis of allopolyploids
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … applicable for non-model species for which fewer ‘marker’ genes are known that are hallmarks of different cell types.” … collaboratively developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be …
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Insight into the Bacterial Endophytic Communities of Peach Cultivars Related to Crown Gall Disease Resistance.
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Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats
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CAZome comparison in relation to host plant for selected Sordariomycete and Dothidiomycete plant pathogenic fungi
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … metagenome assembly, and even an introduction to data analysis using the  IMG/M system . A Comprehensive Learning …
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Expanding Virophage Diversity
… viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP and … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … including over 28,000 unique MCP sequences.  Further analysis led to the identification of 328 “high quality” …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… below, captions are available) spotlighted the metabolomic analysis capability available through the  Community Science … (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal calls, projects can request up …
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