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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome … mentors TBK Reddy and Dimitri Stamatis, Porting XML/Python Based Quality Control to Database/Java Based Process in Gold …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy … Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest … are available on JGI’s fungal portal  MycoCosm . Based on these analyses, we conducted further field …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics … is wild,” and admitting, “friends give me a hard time for that.” But the title brought him back to his first … and sequence who’s making what, that the context at a microscale is really what counts in determining our ability to …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete … the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … JGI as a leader in single-cell genomic amplification at a large scale. Summary The two most common methods for …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates … exercise helped us in filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal …
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MGM Workshop at Fisabio Summer School 2026
… Register here for the workshop The MGM Workshop is Module 4 of the Fisabio Summer School.  The workshop is addressed to students … The workshop will train participants in state-of-the-art analytical methods in this area, by means of theoretical …
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Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility.
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address … soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … for genetic engineering. Our hope is that the community at large will follow that up,” Serrano said.  This work focused …
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Transcriptomic data sets for Novosphingobium aromaticivorans DSM12444 and a ΔSARO_RS14285 mutant grown in the presence of glucose and either protocatechuic, vanillic, syringic, or 4-coumaric acid
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JGI-USCCN Strain Sequencing Opportunity
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special … The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … as biocontrol agents and to promote plant growth. It is the largest genus within Actinobacteria and therefore a …
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Plant Program User Advisory Committee
… The Plant Program Advisory Committee is chartered to offer advice, guidance … scientific relevance and quality. The Committee does not perform management functions nor does it direct the Program's …
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