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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … from Ed Hall, an ecologist at Colorado State University in Fort Collins. He’s part of a JGI-supported project studying …
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Green Algae Reveal One mRNA Encodes Many Proteins
… Gene expression in eukaryotes was long held to be monocistronic – that is, a … research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National … a DOE Office of Science user facility. The work was partly enabled by the “Facilities Integrating Collaborations for …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics … is wild,” and admitting, “friends give me a hard time for that.” But the title brought him back to his first … Dianne Newman is a Gordon M. Binder/Amgen Professor of Biology and Geobiology and the Executive Officer for Biology …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after … The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, … The team’s research at both the JGI and EMSL was enabled by the Facilities Integrating Collaborations for …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … A missing gene from this mutant library leads to photosynthetic defects, offering insights into how algal ponds …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … and analysis of their data at the time. Following the publication of their paper in 2011, Dr. Sekimoto from …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley … collaborations in the fields of genomics, structural biology, bioimaging, and water research. The meeting … from the ACTIVE SITES Research Center (ACSI), the Centre for Water and Environmental Research (ZWU) of the University …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into … of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … underestimated.” In the March 4, 2019, issue of Nature Microbiology , they mined the Integrated Microbial Genomes & …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where … of a strong core foundation of robust mass spectrometry workflows for polar and nonpolar metabolite analysis, … large metabolite databases by running 1000s of metabolite standards, and development of high-throughput untargeted …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing … in the next generation of flowering vegetation. In return for their services, bees eat plant nectar and pollen. Nectar … all the energy they can. The results in the study were enabled by a number of  in vitro and  in vivo experiments, …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … was being waged. In the JGI@25 video below, Susan Lucas, former JGI Production Department Head and current ESnet … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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