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Microbial Ecology in a Changing Climate
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Microbial adaptability in changing environments
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A toolkit for microbial community editing
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Biotech Partners Summer Intern Co-Authors NAR Paper
Kaushal Sharma, one of five Antioch High School rising … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … that showcase our collaborations and capabilities to enable great science that will help solve energy and … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … for Biotechnology. “The goal has been for all this new cotton work, and even the original cotton project was to … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Learning to Look
Machine learning approach significantly expands inovirus … genomes. “These genomes are so special, regular search methods don’t work,” said Roux. “The machine learning … water, and humans—around the world. By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. … abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint … vigilant stewardship as JGI’s Operations Deputy has come to a close as this previously retired Naval Commander … Ray and it has been especially called on in the move to the new building where that was really critical. It takes a …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that … Virus)—for the virophage marker gene MCP, they were able to identify 44,221 total virophage partial sequences, … of 328 “high quality” (based on completeness) diverse new virophage genomes containing all four core genes. These …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day … and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th …
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Trent Northen
Dr. Northen is currently a Senior Staff Scientist at Berkeley Lab. Since joining … JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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