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Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi.
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Comparative genomics analysis of drought response between obligate CAM and C3 photosynthesis plants
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Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development
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Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi
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EnZymClass: Substrate specificity prediction tool of plant acyl-ACP thioesterases based on ensemble learning
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Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater
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Forming Scientific Connections and Building Community
… intern means going to the workshops and listening to the speakers talk about their own experiences and what their … learned so much in terms of scientific approach and as a plant biologist, I have learned so many techniques and … distachyon root transporters in plant-microbiome interactions ” Cory-James Pugne-Andenoro : “The best part of …
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Benjamin Cole
Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their … Dr. Cole’s research focus has been on understanding how microbes can colonize plant roots, focusing on genetic …
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… panel discussions, workshops, and informal networking events. JGI will present both a genome center talk and a …
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How to Target a Microbial Needle within a Community Haystack
… for capturing the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A … to first target cells from communities of uncultivated microbes, and then efficiently retrieve and characterize … and single-cell genomics, the vast majority of microbes that play key roles in global biogeochemical cycles …
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Supercharging SIP in the Fungal Hyphosphere
… most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial … it. The isotopes are incorporated into the DNA of specific microbes who consume the labeled food or water. Later, their … of climate change. The team’s study used samples from the area immediately surrounding AMF’s long filaments, or …
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