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David Goodstein
… basal metazoans and plants. Working with a talented team of scientists and software engineers, Dr. Goodstein currently … for the JGI's direct collaborators and the wider plant science community. Dr. Goodstein’s group also develops and … 2023. JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the …
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Tanja Woyke Elected to American Academy of Microbiology
Genomics and Systems Biology Division of the Lab’s Biosciences Area since 2018. Woyke also holds appointments as … has been groundbreaking. The JGI is most fortunate to have scientists of Dr. Woyke’s caliber support the JGI User community in accessing our resources and help them to push the boundaries of energy …
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Alabama A&M Interns Access An Abundance of Knowledge
… enriching workshops and networked with fellow interns and scientists alike. Want to learn more about their experience? … A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna … a JGI intern means not only just watching and observing your mentor, but also being a support for them and …
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Learning to Look
July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a … result of this hidden diversity of inoviruses now overhauls our perception of this virus group – from minor curiosities …
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Supercharging SIP in the Fungal Hyphosphere
… helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … is a long and laborious process — as well as a key way scientists study microorganisms. Because microorganisms live … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National …
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Effects of Polar Light Cycle on Microbial Food Web
… lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in … dominates these polar environments greatly contributes to our larger understanding of carbon and other nutrient cycles … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected place: … in oceans or soils.  A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  …
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Creating an Energy Market for Miscanthus
… plant? Meet Miscanthus , an attractive addition to your garden and a potential fuel for the future. But, to be … will need some upgrades. In this episode, hear from scientists working on understanding Miscanthus biology and the economic terrain to help make the plant a …
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When “The Blob” Made It Hotter Under the Water
… climate change impact on marine microbial communities. The Science A team of researchers tracked the impact of a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … They recently shared their findings in Communications Biology . They reported that the heatwave caused the …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… have worked to replace yeast’s native chromosomes with synthetic versions. This project has turned out to be an …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … in metabolically active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of …
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A Plant Root Atlas for Tracking Developmental Trajectories
… datasets. The work was  recently published in the journal  Developmental Cell and provides a community resource … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Report Released Berkeley Lab News:  Five Berkeley Lab Scientists Receive Prestigious Five-Year Research Grant   … …
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