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Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont
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Triggering Morel Fruiting
… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes … by the black morel, as well as the gene-expression programs encoding the biochemical processes unveiled by …
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JGI Hosts GPU Hackathon in May
… processing unit (GPU)-based high-performance computing resources, an upcoming hackathon led by the Oak Ridge … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” …
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N-dependent dynamics of root growth and nitrate and ammonium uptake are altered by the bacterium Herbaspirillum seropedicae in the cereal model Brachypodium distachyon
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Correlation-based network analysis combined with machine learning techniques highlight the role of the GABA shunt in Brachypodium sylvaticum freezing tolerance
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Busting the Unbreakable Lignin
… evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … yield fuels, and removing lignin in order to do so is a resource-intensive process. Now, a new study shows how …
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Integrating Experimentation with Data
Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated … for more details and registration information. Sign up for our newsletter , the JGI Primer, to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected … in oceans or soils.  A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  … a complex pattern of evolution for genes related to eating plant compounds in both the oceanic and hot spring  …
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Analysis of Leaf and Root Transcriptomes of Soil-Grown Avena barbata Plants
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Exploring the roles of microbes in facilitating plant adaptation to climate change
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An orphan gene BOOSTER enhances photosynthetic efficiency and plant productivity
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Three mutations repurpose a plant karrikin receptor to a strigolactone receptor
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