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Qualitative and quantitative resistances to leaf rust finely mapped within two nucleotide‐binding site leucine‐rich repeat (NBS‐LRR)‐rich genomic regions of chromosome 19 in poplar
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Training the Next Generation of Talent
… his summer research at the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user … first iteration of this program and we started small with just two people,” Visel says. “They were directly assigned to the two of us just to get the structure set up and collect the first round …
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The transcriptional activator ClrB is crucial for the degradation of soybean hulls and guar gum in Aspergillus niger
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Understanding Wildfire Recovery, Starting in Soil
… of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees to … to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … they reconstructed and examined over six hundred bacterial genomes — mainly actinobacteria, as well as proteobacteria, …
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Chapter Seven Phylogenetics and Phylogenomics of Rust Fungi
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Cultivating Symbiotic Antarctic Microbes
… consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … microbes, researchers have been able to gain further insights about how microbes have adapted to thrive in polar … dependent on the other for required nutrients—is genome size. The obligate symbiont’s genome is often reduced …
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Rex Malmstrom
… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … D. et al. 2016. SAR11 bacteria linked to ocean anoxia and nitrogen loss. Nature 536 (7615), 179 Hatzenpichler, R. et … PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in …
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Supercharging SIP in the Fungal Hyphosphere
… over 80% of land plants, which means they offer a lot of insights into how plant materials can be broken down for … National Laboratory and the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … The work conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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JGI announces 2024 New Investigator portfolio
… floor and along ocean shores. Their results could bring key insights into how our planet’s nutrient cycles are …
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A Shrubbier Version of Rubber
Right now, our natural rubber comes from just one tree species: Hevea brasiliensis . It’s great at …
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Forming Scientific Connections and Building Community
This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Merced through their long standing internship program. In just two months, the students participated in networking … Mentors: Jessen Bredeson & Albert Wu Project: “ Pangenome de Bruijn Graph Simplification ” Peter Nguyen : …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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