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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to … from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … The planet’s resources are being stretched by a growing human population and increasing demand for agricultural … and how these conditions impact the crop and its microbiome. For three consecutive years (2016-2018), …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers … (BGCs). BGCs make diverse molecules of value to both human and ecosystem health. But bacteria often fail to … have also harnessed CRAGE to create a plant-fertilizing microbiome. In work  reported in  Applied and Environmental …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … for metagenomic sequencing. A study  recently published in  Microbiome shows that the way nutrients flow through the … (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new … — but the experts we were able to work with on this project to ask questions about structure and function,” …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of … the field, work at the lab bench, and also do some computational analyses at their desks. As part of the DOE JGI’s … worked with Zhong Wang’s group on an aspect of the same project assigned to Sharon and Cristhian; and, Lizhen Shi , …
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JGI Announces 2025 New Investigator Portfolio
Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … researchers) Each year, the JGI searches for novel research projects from PIs who have not led any previously accepted … fungi, the effects of biochar on rhizosphere microbiomes, and the metabolic pathways of algae. They will …
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint … science opportunities. Learn how to apply for a project with the JGI Community Science Program, and how you …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear … to a more sustainable world. Learn about JGI-supported projects, delving into the researchers’ motivations, the …
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