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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science … was  recently reported in Nature Communications. The work was co-led by Victoria Turzynski in Alexander Probst’s … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were …
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Ben Bowen
Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing … with the unknown: metabolomics and metabolite atlases. Journal of the American Society for Mass Spectrometry, 21, …
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental samples and … microbes have adapted to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light on the range of …
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Extracting the Secrets of Secondary Metabolites
Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … exactly how P. luminescens and its secondary metabolites work could yield new tools for pest control. Secondary …
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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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Comparative genomics and expression levels of hydrophobins from eight mycorrhizal genomes
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The Capsella rubella genome and the genomic consequences of rapid mating system evolution
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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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Genome Analysis of a Verrucomicrobial Endosymbiont With a Tiny Genome Discovered in an Antarctic Lake
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Busting the Unbreakable Lignin
… degradation products that accumulated as the fungus did its work.  The UC Santa Barbara team worked with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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