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… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … essential to  Y. lipolytica . They identified 1,377, or 17.5 percent, of  Y. lipolytica ’s genes to be required for …

… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work …

… Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in …

… nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies … dataset of its kind ever assembled. The team identified 15 core genes shared across all fungi, and found that some of … tools trained on known gene sequences — to scan over 9,000 publicly available fungal nuclear genome assemblies in …

… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of the Microbiome Data Prize by the American … Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a combination of experimental …

… in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to help train the … email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) … Education (E4) community-building workshop at the  2019 Association for Environmental Studies and Sciences (AESS) …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … made publicly available on relevant JGI portals (i.e. JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) …

… which affects a number of environments, including plants, soil, and the gut. To better understand the dynamics of this … at the University of California, Berkeley and the Joint Genome Institute, a DOE Office of Science User Facility, … databases for homologous YcgR proteins and chose a set of 92 proteins for functional characterization as candidate …

… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … and co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome …

… technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …

… to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry in one research …