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ARBitrator: a software pipeline for on-demand retrieval of auto-curated nifH sequences from GenBank
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A Xyloglucan Backbone 6-O-Acetyltransferase from Brachypodium distachyon Modulates Xyloglucan Xylosylation
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Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials
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Yasuo Yoshikuni
Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, … biosystems design for DOE-mission-relevant discovery and applications. This program has supported over 250 projects … Discovering untapped biochemistry in microorganisms from hidden corners. Nature Review Microbiology , 2022 …
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VEGA Symposium
… with NIST,  the goal of the Viral EcoGenomics & Applications (VEGA) symposium was to bring together a “Viral EcoGenomics” community to foster …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of the … in two subsurface ecosystems in very different parts of the world: Crystal Geyser, Utah, USA, and Horonobe Underground Research Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  …
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SPRUCE-ing Up Science
… is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in his backyard in … ripples through the trees in his backyard. Originally from northern California and one of the first students to … both a midterm and a final round of presentations.  “That really helped build my communication skills. Their questions …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169T (DSM 21076T) from a sea urchin in southern China
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Work With the JGI! Tips for a Winning CSP Proposal
The JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics … open to scientists at any career stage, anywhere in the world, for free. We accept new projects related to energy … later on in the spring. In this episode, hear proposal tips from Tanja Woyke, who runs user programs at the JGI, and …
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Building Sphagnum Genomic Resources
… (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on … researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, sphagnum can also act as a protective layer insulating permafrost from the warming regional temperatures. For this reason, the …
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Towards optimized viral metagenomes for double-stranded and single-stranded DNA viruses from challenging soils
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