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Marine Microbe Contains Multitudes
… periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, … data gave the team unprecedented resolution to study the network of genes that contribute to the metabolisms that … on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, …
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How Maize Makes An Antibiotic Cocktail
… terpene substrates into many products; giving scientists a bigger bang for their buck. The research team reports that … synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … 1758976 to E.S. and P.Z.) for diterpenoids, by a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant …
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IMA genome-F18
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone … the goal is to create an entirely human-generated yeast genome. …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. To put it into context, it would … appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … “The big surprise of the project was to realize that these genome copies that are spread throughout the whole cell are …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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JGI-UC Merced Interns Share Their 2021 Experiences
… research. And for the first time in this program’s history, two interns returned to re-engage with their mentors from … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on … Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for Complete Categorization of …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous … viruses (from environmental metagenome samples) from IMG/VR , a database that is part of the Integrated Microbial …
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JGI Interns at UC Merced Earn CAMP Merit Awards
… to promote diversity and inclusion in science and research, two undergraduate students from UC Merced recently had …
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Enlarging Windows into Understanding Gene Functions
… four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … led by co-first authors Leo Baumgart and Juna Lee developed two approaches that build upon the DAP-seq technology … to control new functions,” O’Malley said. “Combining the two approaches of Biotin DAP-seq and multiDAP allows for …
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Draft genome sequence of Chryseobacterium limigenitum SUR2T (LMG 28734T) isolated from dehydrated sludge
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