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Benjamin Cole
… was primarily on how plants interpret different light cues by altering their growth program, and on how plants … Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List …
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The Big Deal About Short Plants
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THE Bioenergy Tree
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … Brassicales Genome Initiative. Brassicales is represented by more than 4,700 species, and the proposal focuses on …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome … function. … B.Sc. (HONS) – University of Wales, Cardiff, Genetics Ph.D. – University of Cambridge., Microbial … 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and …
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Rex Malmstrom
… of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the … bacterial cells and amplifying their genetic material, thus bypassing the need to culture these microbes in the lab. … single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… in one individual. But some, including shrub willow  Salix purpurea , employ the evolutionary strategy we are far … for the next generation. Understanding the mechanisms by which they reproduce can help guide breeding efforts. For … of sex determination could also lead to new approaches to accelerate flowering, which can speed the pace of breeding. …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
Congratulations to the 2023 Highly Cited Researchers from the JGI recognized for … of multiple highly cited papers during the last decade” by Clarivate Analytics. This year’s list features 6,849 … Nikos Kyrpides (Biology and Biochemistry) Dan Rokhsar (Cross-field) Simon Roux (Biology and Biochemistry, …
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New Research Sheds Light on Diversity in the Deep Sea
… and the University of Wisconsin-Madison collected 40 samples from five oceanic regions to better understand how … biofuel production and more. … This work was funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development … of big data. … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and Biotechnology, … Outstanding Scientific Achievement Award (2022) ASM’s USFCC/J. Roger Porter Award (2018) Honorary Doctorate from the …
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Tracing the Evolution of Shiitake Mushrooms
…   The Science Shiitake mushrooms get their name from the same place they often source their nutrients — the shii … a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and … in the global  carbon cycle . As decayers, Lentinula fungi access carbon previously locked away in wood, converting it …
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When “The Blob” Made It Hotter Under the Water
… the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The Blob, … model of how marine microbial communities are affected by warming events. More time-series studies could help … such as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean water about a third …
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