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Whole Community Metatranscriptomes and Lipidomes Reveal Diverse Responses Among Antarctic Phytoplankton to Changing Ice Conditions
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … & Applications (VEGA) Symposium , which will take place later this year in Berkeley, Calif. Convening the “viral … analysis to better characterize how viruses infect soil microbes and influence how soil ecosystems function. He was …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … mentor Robert Bowers, Mobile Genetic Elements and CRISPR Spacers in the Conifer Needle Microbiome Carlos Vazquez and … extremophile protists from a hypersaline alkaline lake in California. Sandra Hernandez Gonzalez : Out of this …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … are a little bit stronger in computing, so I was kind of worried coming into the, the internship that maybe I didn’t have as good of skills as somebody else might have. But Robert, uh, Bob …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially … kind of plant metabolism. This metabolism, called crassulacean acid metabolism, or CAM — that’s C-A-M, for short — …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a … rig explosion that dumped nearly five million barrels of light crude oil spilling into the Gulf of Mexico, … the mystery of the missing oil: “There was oil on the surface and oil below, but no oil in between.” To find an …
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iPHoP: A Matchmaker for Phages and their Hosts
… to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … the roles viruses and their host microbes play in nutrient cycles. … This work was supported by the U.S. Department of …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among … outline more targeted approaches to reconstruct individual microbes in an environmental sample beyond the … While microbes regulate the planet’s biogeochemical cycles, viruses infecting microbes shape global ecological …
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Draft Genome Sequences of Chlamydiales Bacterium STE3 and Neochlamydia sp. Strain AcF84, Endosymbionts of Acanthamoeba spp.
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … on cotton production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and importance in the fabric of our lives. In the United States, cotton production …
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