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… and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …

… classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … billion proteins with massively parallel computations.”  Guided by JGI scientists, the team embarked on a mission to … the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, … this approach to uncover a novel group of giant viruses dubbed “Klosneuviruses.” Previously known members of the viral …

… and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …

Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in … she joined LBNL to spearhead the development of a joint user capability between the JGI and Molecular Foundry for … Blaby-Haas CE, Friedrich T, Daldal F, Koch H. (2019) The  cbb 3-type cytochrome oxidase assembly factor CcoG is a …

Lead Dan Rokhsar, Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category … categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category … part of a JGI team that led a community effort to develop guidelines and best practices for defining virus data …

… quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In … include JGI’s emerging leadership role in a Microbiome Data Science effort (pages 37-39) and the launching of a … our Berkeley Lab colleagues, particularly with the other user facilities including the Advanced Light Source, the …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … be specific to species or groups of species.  The genome data also revealed that green millet was introduced into the … and Adam Healey, two of the co-first authors, led the data analyses and assembled the green millet “pan-genome” (a …

… coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … S. coelicolor . With results from the research, RIViT-seq data have increased the identification of the number of …

Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …