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2023 Progress Report
… bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic …
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High quality draft genome sequence of Meganema perideroedes str. Gr1T and a proposal for its reclassification to the family Meganemaceae fam. nov.
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Filling in the Plant Tree of Life
… are from narrow swaths of the plant tree of life. One project aims to change that. …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint appointment with … Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
Creek Featuring a casual, candid, C-level panel discussion with local industry leaders: Arvind Gupta , Managing … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …
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Mo than Meets the Eye: Genomic Insights into Molybdoenzyme Diversity of Seleniivibrio woodruffii strain S4T
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … be engineered. “Piloting access to this emerging technology with JGI users will enable us to assess CRAGE’s impact, … the amount of DNA that can be inserted at a time. In a  project detailed in  ACS Synthetic Biology , Yoshikuni and …
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Gotta Catch 'Em Gall
In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these …
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Environmental Genomics Group
… lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Evolution of a Fungal Gene Expression Regulator
… considered for bioenergy feedstock development. Summary With the aim of producing at least one reference genome for … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… have worked to replace yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, with some artistic endeavors along the way. Eventually, the …
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