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CoverM: Read alignment statistics for metagenomics.
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Eric Olo Ndela
Eric’s research is focusing on the development of new computational approaches to identify and …
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Antonio Camargo
Antonio’s research is focusing on the development of new methods for the identification and classification of Mobile Genetic …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or … Tringe and Tanja Woyke, were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) … colonization patterns in eelgrass . Igor Grigoriev’s recent work includes the discovery of anaerobic fungi’s …
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Crysten Blaby-Haas
Focus Area (SFA). In 2022, she joined LBNL to spearhead the development of a joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … Services Honoree, 2022 Peter-Boyer Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s …
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Fungus Fuels Tree Growth
… always found among and within poplar trees, and in an effort to understand its influence on the plant, a team of … fine-tune their engineering efforts of both plants and root microbiomes to grow energy crops more efficiently. Summary … cuttings included genotypes from the DOE BioEnergy Science Center (BESC), predecessor of  DOE’s Center for Bioenergy …
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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Supercharging SIP in the Fungal Hyphosphere
… successfully automated aspects of a commonly-used process for studying microbial communities, with results published … with potential applications in industry and biotechnology for the production of  clean energy . Summary Arbuscular … materials can be broken down for things like biomass and  biofuels . However, AMF and the microbial communities they …
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of …
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JGI Early Career Researchers Featured in mSystems Special Issue
… traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … Roux are part of the first cohort to receive Early Career Development awards as part of the Laboratory-Directed …
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The More the Merrier: Making the Case for Plant Pan-genomes
… staples and candidate bioenergy feedstock crops, are recent polyploids. Crop breeders have harnessed polyploidy to … researchers have sought to learn the origins, evolution and development of plant polyploids. A multi-institutional team … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature …
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