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Calculating the Costs of Multiple Switchgrass Gene Copies
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered that the candidate … appeared in the Proceedings of the National Academy of Sciences (PNAS). Switchgrass, Panicum virgatum , is a …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… our collaborations and capabilities to enable great science that will help solve energy and environmental … to boost understanding of environmental viruses. In 2016, Nikos Kyrpides at the JGI led a team that combed datasets … multiplied the number of known viral genes by a factor of 16. The same year, the JGI expanded its existing Integrated …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … biochemical reactions. For this article alone, more than 600 genomes (dubbed “GEBA-Actino”) were sequenced from DSMZ … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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JGI@25: Building a Better Bean
… our collaborations and capabilities to enable great science that will help solve energy and environmental … Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to darken. Called …
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JGI@25: Strengthening Soybean
… our collaborations and capabilities to enable great science that will help solve energy and environmental … alive. Once a crop is infected, ASR can decimate up to 60-90% of its yield.  (Learn more about the soybean genome … in this JGIota, a Genome Insider podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis of …
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Simon Roux
Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France Ph.D. in … in the global microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an … standing virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses the quality …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … scientific approaches to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the …
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Ian Blaby
… metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool … energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. al., Genome‐wide analysis on Chlamydomonas … Chlamydomonas genome project: a decade on. Trends in plant science . 19: 10, 672-680. 2014 Blaby, et. al., …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… determination as they came onsite. From data carpentry to science communications, their schedules were filled with …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … scientific approaches to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the …
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MGM Workshop at Fisabio Summer School
… professionals of biology, biomedical research, the health sciences and related fields who are interested in learning …
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