Results

Single Cell Research Group
… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … relationships and to provide valuable reference genomes in under-populated areas of the tree of life, as reference genomes are critical to serve as phylogenetic anchors for …
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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Analysis of Porphyra Membrane Transporters Demonstrates Gene Transfer among Photosynthetic Eukaryotes and Numerous Sodium-Coupled Transport Systems      
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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Frequently Asked Questions: Project Management
… sample and project metadata, and to access JGI tools and systems. … Go to the “ edit contacts ” page in your account. … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … are available for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ …
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Enlarging Windows into Understanding Gene Functions
… factors that control how genes are turned on is known as DNA affinity purification sequencing or DAP-seq. … it can also serve as a stepping stone to studying many genomes simultaneously through multiDAP, which allows … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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JGIota: The Algae Nicknamed ‘Chlamy’
… is also a faculty scientist in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… majority of the ground cover in peatlands. These boggy ecosystems are acidic and have very little oxygen, which is … HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, …
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