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Making a Lichen Together
The Science The humble lichen is a superorganism: one being that is actually comprised of two (or more) … at the JGI contributed to annotation of the genomes, available online at  PhycoCosm (for the alga genome) and  … generally anticipated that in this symbiosis going back hundreds of millions of years, accidental gene swaps …
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Omega: an Overlap-graph de novo Assembler for Metagenomics
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Extreme Scale De Novo Metagenome Assembly
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January … in the physical sciences in the United States, and is working to address some of the most pressing challenges of …
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Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment
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Microorganisms Involved in Methylmercury Demethylation and Mercury Reduction are Widely Distributed and Active in the Bathypelagic Deep Ocean Waters
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The … that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Transcription factors control …
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The survivor strain: isolation and characterization of Phormidium yuhuli AB48, a filamentous phototactic cyanobacterium with biotechnological potential
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De novo DNA synthesis using polymerase-nucleotide conjugates
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Dealing with Drought: Uncovering Sorghum’s Secrets
… genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in … P­­lant Gene Expression Center, Pacific Northwest National Laboratory, and the U.S. Department of Energy Joint Genome … Some different responses relate to functioning of the photosynthetic machinery, which requires water to function. …
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User Support Analysis Group
We perform analysis for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community … researchers led by David Weston of Oak Ridge National Laboratory make the case for  sphagnum as “an unparalleled …
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