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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… metabolic engineering and biocatalyst design will target sustainable energy solutions, focusing on lignocellulosic thermophiles and polymer … nutrient cycling, and biogeochemistry.  You can learn more about this call, as well as our smaller-scale New …
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Nikos Kyrpides
… at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome … through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of mobile genetic … S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale proposals have been accepted … were submitted by researchers who had not been a primary investigator on any proposals previously accepted … the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how they deter …
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Metabotyping as a Stopover in Genome-to-Phenome Mapping
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An amoeba and a cyanobacterium walk into a bar...
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Katherine Louie
… the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the … turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and custom software …
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Busting the Unbreakable Lignin
… and lignin, cumulatively called lignocellulose, are the primary components of hardy cell walls. It’s the cellulose and … The Impact Traditional methods for breaking down biomass use aerobic methods (those using oxygen) to remove lignin … biomass production and bioproduct engineering. Summary That organisms make use of cellulose and hemicellulose is …
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Evolution of a Fungal Gene Expression Regulator
… at the 5th position on its carbon ring, or 5mC. In many organisms, 5mC is an important piece of how they regulate … the genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may … being considered for bioenergy feedstock development. Summary With the aim of producing at least one reference genome …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, … JGI has hosted interns from a number of universities and organizations. From field research and wet lab experiments, …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it … how virus infections cause significant metabolic changes in marine microbes, the answer is no. They refer to the … ocean could fix less carbon when infected. Little is known about virus-infected microbial cells that are transformed …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… JGI’s Operations Deputy has come to a close as this previously retired Naval Commander retires from Berkeley Lab. For … operations leader,” said Director Witherell in his event remarks. “I feel that is something crucial to our success, and … is still good. “I noticed right away,” said Ellen Ford about Ray’s personal impact on her, “that you started …
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