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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started … the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought … have a number of initiatives across several different campuses with this being our largest and most successful one. …
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Marine Microbe Contains Multitudes
… different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … surface, to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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David Goodstein
… equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of … Project, version 6: Reference assemblies for mating-type plus and minus strains reveal extensive structural mutation in …
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Finding the Fermenters
… of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this …
Learn more
Green Algae Reveal One mRNA Encodes Many Proteins
Academy of Sciences , a team of researchers has found numerous examples of polycistronic expression – in which two or … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab and the Environmental …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State Fresno) and two …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… they need to survive. To fill in their nutrient gaps, they must latch onto a larger host — often, a fellow archaeal … cycling across the planet. Summary To understand more about how archaeal hosts and hitchhikers coexist, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genes from isolates, there isn’t much scientists can tell about its function or its origin. As a result, these genes …
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Plant-Microbial Interactions Group
… detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … 10.1073/pnas.1907500116 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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