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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the … in 1989, as a member of the Physics Department and in 2002 he became a Professor of Genetics, Genomics and …
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Extensive Reorganization of the Plastid Genome of Trifolium subterraneum (Fabaceae) Is Associated with Numerous Repeated Sequences and Novel DNA Insertions
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The GC-Rich Mitochondrial and Plastid Genomes of the Green Alga Coccomyxa Give Insight into the Evolution of Organelle DNA Nucleotide Landscape
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … deployed (as the foundation for Phytozome v10) back in 2014.  Several components of that codebase are no longer …
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Draft genome sequence of Trichococcus flocculiformis DSM 2094T isolated from bulking sludge in Germany.
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Mapping the Earth’s Hidden Fungal Kingdom
… with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have … plant and animal genomes can sprawl across billions of DNA base pairs, most fungal genomes contain fewer than 50 … entirely new capabilities through partnerships with bacterial symbionts, and how others revolutionized their …
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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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Genome Sequences of 42 Bacteria Isolated from Sorghum bicolor Roots
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through … experiment in the Sierra Nevada mountain range since 2014 to learn more about the microbial responses and … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic …
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Bacterial Genome Annotation
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A bacterial toolkit for plants
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