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Complete Genome Sequence of an Evolved Thermotoga maritima Isolate
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently published a Nature … genome duplication occurs within a single species. By contrast, “allopolyploids” arise when different ancestral … and the  oilseed crop false flax – genomes that have been sequenced by the JGI – and the common strawberry, which is …
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Katherine Louie
… samples in support of user science.  Capabilities offered by the platform are a result of Dr. Louie’s establishment of … metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … her team work with other JGI scientists in development of new, advanced mass spectrometry research products such as …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… first time, the sex chromosomes of shrub willow have been sequenced with sufficient resolution to analyze their … for the next generation. Understanding the mechanisms by which they reproduce can help guide breeding efforts. For … mechanisms of sex determination could also lead to new approaches to accelerate flowering, which can speed the …
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Eelgrass Proves to Be Much Younger Than We Thought
… able to spread quickly and establish itself in a variety of new environments.  This all started roughly 250,000 years … locations.  One group investigated changes in protein sequences, while others analyzed single point mutations … carbon sink capabilities.  … This study was supported by a PhD scholarship from the China Scholarship Council to …
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A One-Stop Shop for Analyzing Algal Genomes
… harnessing algae for bioenergy and the greater bioeconomy. By bringing together publicly available genomic data on … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, diversity, …
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A One-Stop Shop for Analyzing Algal Genomes
… harnessing algae for bioenergy and the greater bioeconomy. By bringing together publicly available genomic data on … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, diversity, …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State University, Jason Stajich … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong … to the terrestrial ecosystems exposed fungi to numerous new ecological niches and triggered rapid diversification of …
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MeCorS: Metagenome-enabled error correction of single cell sequencing reads
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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Genome Sequence of the Arctic Methanotroph Methylobacter tundripaludum SV96
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Complete Genome Sequence of the Haloalkaliphilic, Hydrogen-Producing Bacterium Halanaerobium hydrogeniformans
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