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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading … Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in … which is something I didn’t even know existed before. Name: Deepika Gunasekaran Class Year: 2nd year graduate student in …
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Sequencing crop genomes: approaches and applications
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Selection to sequence: opportunities in fungal genomics
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Frameshift detection in prokaryotic genomic sequences.
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Draft Genome Sequences of Switchgrass Diazotrophs
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Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended
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Cultivating Symbiotic Antarctic Microbes
… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … in understanding the genomic basis and ecological consequences of microbe-microbe interactions. Using metagenomes … cells, the first member of the Archaea isolated from Deep Lake, the coldest place on Earth known to support life, …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … data set on the IMG portal. The class discovered Actinobacteria, Acidobacteria, and Proteobacteria to be the most …
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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
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