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… Jan. 7: New Capabilities to Study Secondary Metabolism   Although … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from … of Science User Facility, has been developing and applying new genomics capabilities that address these issues. Check …

… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale … molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid transfer and …

… to the sequence’s availability via Phytozome. In 2015,  a new and revised version brought the soybean sequence up to … Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are available on MycoCosm … Institute, who works extensively on ASR. “Having the genomes of a crop like soybean ensures that what we bring to …

… found that anaerobic fungi from herbivore poop might be a new source of novel compounds to help bolster the … a series of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an …

… capability for Auxenochlorella means engineers can produce new bioproducts in a more predictable and reliable manner. … in other algae, this organism lets scientists place new genes precisely where intended due to its capacity for … Finding that "essential" genes can be deleted opens new engineering possibilities. The rapid evolution observed …

… recent studies now suggest the gene cluster predates this microbial group. Recently published in the Proceedings of … separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them archaea. The … These two things combined led us to conclude that our new methanogen did not belong to the Euryarchaeota, the …

… website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … choose the genome you’re after as the dataset. From the (new and improved JGI Data Portal).  Go to  … PhytoMine and keep it current given the accelerated rate of new genome releases in Phytozome v13. If the genome(s) …

… with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the JGI, received a message from Andrea … three Genome Watch articles. “Given the great expertise in microbial genomics and metagenomics of the … move toward characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal …