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Viral Genomics Group
… and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … measurements ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question in natural soil ecosystems by combining metagenomics with other omics approaches, including especially …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge … and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These are …
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A One-Stop Shop for Analyzing Algal Genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …
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Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes
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Draft Genome Sequence of the Thermoalkaliphilic Caldalkalibacillus thermarum Strain TA2.A1
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Brachypodium distachyon genotypes vary in resistance to Rhizoctonia solani AG8
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Multi‐omic analyses of exogenous nutrient bag decomposition by the black morel Morchella importuna reveal sustained carbon acquisition and transferring
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Genomic Comparison of Two Family-Level Groups of the Uncultivated NAG1 Archaeal Lineage from Chemically and Geographically Disparate Hot Springs
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… They hypothesized that certain gene families — including fungal genes horizontally transferred — contributed to the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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