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Qualitative and quantitative resistances to leaf rust finely mapped within two nucleotide‐binding site leucine‐rich repeat (NBS‐LRR)‐rich genomic regions of chromosome 19 in poplar
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Tina Clarke
Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
Laboratory (Berkeley Lab) hosted a pitch event promoting fully-supported summer research collaborations through the U.S. Department of Energy (DOE)’s Visiting Faculty Program (VFP) . The VFP is a summer professional … for the summer term (May through August) and selected projects will receive stipend and travel expenses, both for …
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Triggering Morel Fruiting
Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut … source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … it created a subtle flow of nitrogen from the soil towards the exogenous nutrient source. The opposite directions …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … for all this new cotton work, and even the original cotton project was to try to bring in molecular methods of breeding … it stands the test of time and is considered the gold standard by the world cotton community. This is one such example.” …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, … by Congress in 1980 for Superfund sites which are hazardous waste areas that require cleanup and long-term … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … of Texas at Austin professor, “but we really first heard about the JGI synthesis grant during a presentation that … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We took … group, and Ivanova leads the Functional Annotation team. MAGs significantly expanded the estimated diversity of …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is … microbial communities periodically at different depths. In order to determine the genome structure of SAR324 cells and … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … from a wildfire that burned at the Colorado-Wyoming border, about a year after the fire. They sampled soil across … DOE Office of Science National User Facilities in a single project. … This work was supported through a USDA NIFA award …
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